Most recent publications

  • ANGUSTIFOLIA 3 binds SWI/SNF chromatin remodeling complexes to regulate transcription during Arabidopsis leaf development. Plant Cell
    Vercruyssen, L., Verkest, A., Gonzalez, N., Heyndrickx, K., Eeckhout, D., Han, S., Jégu, T., Archacki, R., Van Leene, J., Andriankaja, M., De Bodt, S., Abeel, T., Coppens, F., Dhondt, S., De Milde, L., Vermeersch, M., Maleux, K., Gevaert, K., Jerzmanowski, A., Benhamed, M., Wagner, D., Vandepoele, K., De Jaeger, G., Inzé, D. [PubMed]
  • Tandem chromatin affinity purification (TChAP) in Arabidopsis cell suspension cultures improves the identification of transcription factor target genes . Plant Physiology
    Verkest, A., Abeel, T., S Heyndrickx, K., Van Leene, J., Lanz, C., Van De Slijke, E., De Winne, N., Eeckhout, D., Persiau, G., Van Breusegem, F., Inzé, D., Vandepoele, K., De Jaeger, G. [PubMed]
  • The spirit of competition: to win or not to win. PLOS Computational Biology
    Szczepinska, T., Iwasaki, W., Abeel, T.

GenomeView

GenomeView logo

GenomeView is a next-generation stand-alone genome browser and editor initiated in the BSB group at VIB and currently developed at Broad Institute. It provides interactive visualization of sequences, annotation, multiple alignments, syntenic mappings, short read alignments and more. Many standard file formats are supported and new functionality can be added using a plugin system.

Java-ML

Java-ML logo Java-ML is a collection of machine learning algorithms with a common interface for each type of algorithms. The library is aimed at software engineers and programmers, so no GUI, but clear interfaces. It provides reference implementations for algorithms described in the scientific literature, it has well documented source code and provides plenty of code samples and tutorials.

Other projects